Aeromonas spp.

Source of isolates submitted to the Aeromonas spp. database

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The MLST scheme hosted in this database was developed by barbara.cardazzounipd.it (Barbara Cardazzo) and colleagues at the University of Padova, Italy. It is described in Martino et al. 2011 Appl Environ Microbiol 77:4986-5000.

The database is curated by barbara.cardazzounipd.it (Barbara Cardazzo).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.