Piscirickettsia salmonis

Source of isolates submitted to the Piscirickettsia salmonis database

Submit

This MLST scheme was developed by adolfoislagmail.com (Adolfo Isla) (Universidad Austral de Chile), ayanezuach.cl (Alejandro Yañez) (FONDAP-INCAR, Universidad Austral de Chile), jfigueroauach.cl (Jaime Figueroa) (Universidad Austral de Chile) and reavendanoyahoo.com (Ruben Avendaño) (Universidad Andres Bello). It is described in Isla et al. 2019 J Fish Dis 42:721-737.

The primary curator for this scheme is adolfoislagmail.com (Adolfo Isla).

Primers

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Allele sequences:

Last updated:

2024-11-08

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.

Genomes:

Last updated:

2024-11-08

Piscirickettsia salmonis

Typing

Isolate collection

Genome collection

Contact

Cite us

Supported by

Piscirickettsia salmonis

Typing

Isolate collection

Genome collection

Contact

Cite us

Follow

Supported by