Proteus spp.

Source of isolates submitted to the Proteus spp. database

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The MLST scheme hosted in this database uses a combination of the MLSA scheme described in Dai et al. 2015 BMC Microbiology 20:152 and the atpD locus described by Algammal et al. 2021 Sci Rep 11:9476.

Database curated by kayo.biancofiocruz.br (Kayo Cesar Bianco Fernandes).

The preferred citation for this website is:

Jolley et al. Wellcome Open Res 2018, 3:124 [version 1; referees: 2 approved].

Typing

The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).

Isolate collection

The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.

Genome collection

A subset of records within the isolate database may contain genomes assemblies. You can access these from the isolate database by filtering on sequence bin size in a query.