Recent database update activity
2025-04-26:- Clostridium perfringens: 1 MLST profile
- Enterobacter cloacae: 1 isolate
- Escherichia spp.: 30 isolates
- Neisseria spp.: 271 isolates; 8,779 alleles
- Pasteurella multocida: 7 cgMLST (draft) profiles
- Streptococcus pneumoniae: 635 isolates
- Streptococcus suis: 1 isolate; 1 genome; 1 MLST profile
- Vibrio cholerae: 10 isolates
- Acinetobacter baumannii: 7 MLST (Oxford) profiles
- Citrobacter spp.: 1 isolate; 1 genome; 1 MLST profile
- Clostridioides difficile: 26 isolates; 26 genomes
- Clostridium perfringens: 10 isolates; 10 genomes; 971 alleles
- Edwardsiella spp.: 1 MLST profile
- Enterobacter cloacae: 1 genome; 1 MLST profile
- Haemophilus influenzae: 7 isolates; 26 alleles
- Mycobacteria spp.: 1 isolate; 1 genome; 1 allele; 1 MLST profile
- Neisseria spp.: 53 isolates; 271 genomes; 30 alleles; 2 MLST profiles; 19 NG MAST v2.0 profiles; 355 N. meningitidis cgMLST v3 profiles
- Orientia tsutsugamushi: 5 MLST profiles
- Pasteurella multocida: 293 isolates
- Ribosomal MLST: 309 isolates; 26 alleles; 122 rMLST profiles
- Salmonella spp.: 22 alleles; 34 MLST profiles
- Staphylococcus aureus: 2 isolates; 2 MLST profiles
- Streptococcus suis: 5 isolates; 2 genomes; 3 alleles; 2 MLST profiles
- Acinetobacter baumannii: 14 isolates; 3 alleles; 1 cgMLST v1 profile
- Bacillus cereus: 104 isolates
- Campylobacter jejuni/coli: 34 isolates
- Cronobacter spp.: 1 isolate
- Escherichia spp.: 34 isolates; 1 MLST (Achtman) profile
- Haemophilus influenzae: 13 isolates; 43 alleles
- Mycoplasma genitalium: 4 isolates; 2 alleles; 4 MG191-MG309 typing profiles
- Neisseria spp.: 497 isolates; 5,900 alleles; 74 N. meningitidis cgMLST v3 profiles
- Pasteurella multocida: 46 cgMLST (draft) profiles
- Proteus spp.: 12 isolates; 9 alleles; 7 Virulence profiles
- Ribosomal MLST: 85 alleles; 14 rMLST profiles
- Salmonella spp.: 8 alleles; 22 MLST profiles
- Serratia spp.: 7 isolates; 1 allele; 1 MLST profile
- Staphylococcus aureus: 1 MLST profile
- Staphylococcus pseudintermedius: 1 MLST profile
- Streptococcus pyogenes: 1 allele
- Treponema pallidum: 1 allele